recipe bioconductor-generegionscan

GeneRegionScan

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/GeneRegionScan.html

License:

GPL (>= 2)

Recipe:

/bioconductor-generegionscan/meta.yaml

Links:

biotools: generegionscan

A package with focus on analysis of discrete regions of the genome. This package is useful for investigation of one or a few genes using Affymetrix data, since it will extract probe level data using the Affymetrix Power Tools application and wrap these data into a ProbeLevelSet. A ProbeLevelSet directly extends the expressionSet, but includes additional information about the sequence of each probe and the probe set it is derived from. The package includes a number of functions used for plotting these probe level data as a function of location along sequences of mRNA-strands. This can be used for analysis of variable splicing, and is especially well suited for use with exon-array data.

package bioconductor-generegionscan

(downloads) docker_bioconductor-generegionscan

Versions:
1.54.0-0,  1.50.0-0,  1.48.0-0,  1.46.0-1,  1.46.0-0,  1.44.0-0,  1.42.0-0,  1.40.0-1,  1.38.0-0, 

1.54.0-0,  1.50.0-0,  1.48.0-0,  1.46.0-1,  1.46.0-0,  1.44.0-0,  1.42.0-0,  1.40.0-1,  1.38.0-0,  1.36.0-0,  1.34.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-generegionscan

and update with:

conda update bioconductor-generegionscan

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-generegionscan:<tag>

(see bioconductor-generegionscan/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-generegionscan/README.html)