- recipe bioconductor-genestructuretools
Tools for spliced gene structure manipulation and analysis
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/GeneStructureTools.html
- License:
BSD_3_clause + file LICENSE
- Recipe:
GeneStructureTools can be used to create in silico alternative splicing events, and analyse potential effects this has on functional gene products.
- package bioconductor-genestructuretools¶
-
- Versions:
1.18.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.2.0-0
- Depends:
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-bsgenome.mmusculus.ucsc.mm10
>=1.4.0,<1.5.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-gviz
>=1.42.0,<1.43.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-rtracklayer
>=1.58.0,<1.59.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-genestructuretools
and update with:
conda update bioconductor-genestructuretools
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-genestructuretools:<tag>
(see bioconductor-genestructuretools/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-genestructuretools/README.html)