bioconductor-genomicinteractions

downloads

R package for handling Genomic interaction data, such as ChIA-PET/Hi-C, annotating genomic features with interaction information and producing various plots / statistics.

Home http://bioconductor.org/packages/3.7/bioc/html/GenomicInteractions.html
Versions 1.14.0, 1.12.0, 1.10.0
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-genomicinteractions
Links biotools: genomicinteractions, doi: 10.1186/s12864-015-2140-x

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-genomicinteractions

and update with:

conda update bioconductor-genomicinteractions

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-genomicinteractions.