- recipe bioconductor-gispa
GISPA: Method for Gene Integrated Set Profile Analysis
- Homepage
- License
GPL-2
- Recipe
GISPA is a method intended for the researchers who are interested in defining gene sets with similar, a priori specified molecular profile. GISPA method has been previously published in Nucleic Acid Research (Kowalski et al., 2016; PMID: 26826710).
- package bioconductor-gispa¶
-
- Versions
1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.6.0-1
,1.6.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-genefilter
>=1.76.0,<1.77.0
bioconductor-gseabase
>=1.56.0,<1.57.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gispa
and update with:
conda update bioconductor-gispa
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gispa:<tag>
(see bioconductor-gispa/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gispa/README.html)