recipe bioconductor-gnet2

Constructing gene regulatory networks from expression data through functional module inference

Homepage

https://bioconductor.org/packages/3.12/bioc/html/GNET2.html

License

Apache License 2.0

Recipe

/bioconductor-gnet2/meta.yaml

Cluster genes to functional groups with E-M process. Iteratively perform TF assigning and Gene assigning, until the assignment of genes did not change, or max number of iterations is reached.

package bioconductor-gnet2

(downloads) docker_bioconductor-gnet2

Versions

1.6.0-01.4.0-01.2.0-01.0.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gnet2

and update with:

conda update bioconductor-gnet2

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gnet2:<tag>

(see bioconductor-gnet2/tags for valid values for <tag>)