Package Recipe 'bioconductor-gse62944'

recipe bioconductor-gse62944

GEO accession data GSE62944 as a SummarizedExperiment

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/GSE62944.html
License:: Artistic-2.0
Recipe:: /bioconductor-gse62944/meta.yaml

TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944](http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE62944). GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.

package bioconductor-gse62944¶

Versions:

1.26.0-0, 1.22.0-1, 1.22.0-0, 1.20.0-0, 1.18.0-1, 1.18.0-0, 1.16.0-0, 1.14.0-0, 1.12.0-1,

1.26.0-0, 1.22.0-1, 1.22.0-0, 1.20.0-0, 1.18.0-1, 1.18.0-0, 1.16.0-0, 1.14.0-0, 1.12.0-1, 1.10.0-0

Depends:

bioconductor-biobase >=2.58.0,<2.59.0
bioconductor-data-packages >=20221104
bioconductor-geoquery >=2.66.0,<2.67.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gse62944

and update with:

conda update bioconductor-gse62944

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gse62944:<tag>

(see bioconductor-gse62944/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gse62944/README.html)