recipe bioconductor-gsreg

Gene Set Regulation (GS-Reg)

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/GSReg.html

License:

GPL-2

Recipe:

/bioconductor-gsreg/meta.yaml

Links:

biotools: gsreg, doi: 10.4137/CIN.S14066

A package for gene set analysis based on the variability of expressions as well as a method to detect Alternative Splicing Events . It implements DIfferential RAnk Conservation (DIRAC) and gene set Expression Variation Analysis (EVA) methods. For detecting Differentially Spliced genes, it provides an implementation of the Spliced-EVA (SEVA).

package bioconductor-gsreg

(downloads) docker_bioconductor-gsreg

Versions:
1.32.0-01.28.0-21.28.0-11.28.0-01.26.0-01.24.0-11.24.0-01.22.0-01.20.0-0

1.32.0-01.28.0-21.28.0-11.28.0-01.26.0-01.24.0-11.24.0-01.22.0-01.20.0-01.18.0-11.16.0-01.14.0-01.12.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gsreg

and update with:

conda update bioconductor-gsreg

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gsreg:<tag>

(see bioconductor-gsreg/tags for valid values for <tag>)

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