recipe bioconductor-gsreg

A package for gene set analysis based on the variability of expressions as well as a method to detect Alternative Splicing Events . It implements DIfferential RAnk Conservation (DIRAC) and gene set Expression Variation Analysis (EVA) methods. For detecting Differentially Spliced genes, it provides an implementation of the Spliced-EVA (SEVA).

Homepage

https://bioconductor.org/packages/3.8/bioc/html/GSReg.html

License

GPL-2

Recipe

/bioconductor-gsreg/meta.yaml

Links

biotools: gsreg, doi: 10.4137/CIN.S14066

package bioconductor-gsreg

(downloads) docker_bioconductor-gsreg

Versions

1.16.0-0, 1.14.0-0, 1.12.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gsreg

and update with:

conda update bioconductor-gsreg

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gsreg:<tag>

(see bioconductor-gsreg/tags for valid values for <tag>)