recipe bioconductor-hiiragi2013

Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineages

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/Hiiragi2013.html

License:

Artistic-2.0

Recipe:

/bioconductor-hiiragi2013/meta.yaml

This package contains the experimental data and a complete executable transcript (vignette) of the statistical analysis presented in the paper "Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineages" by Y. Ohnishi, W. Huber, A. Tsumura, M. Kang, P. Xenopoulos, K. Kurimoto, A. K. Oles, M. J. Arauzo-Bravo, M. Saitou, A.-K. Hadjantonakis and T. Hiiragi; Nature Cell Biology (2014) 16(1): 27-37. doi: 10.1038/ncb2881."

package bioconductor-hiiragi2013

Versions:

1.34.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1, 

1.34.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0

Depends:

• bioconductor-affy >=1.76.0,<1.77.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-data-packages >=20221109

• bioconductor-genefilter >=1.80.0,<1.81.0

• bioconductor-geneplotter >=1.76.0,<1.77.0

• bioconductor-keggrest >=1.38.0,<1.39.0

• bioconductor-mouse4302.db >=3.13.0,<3.14.0

• curl

• r-base >=4.2,<4.3.0a0

• r-boot

• r-clue

• r-cluster

• r-gplots

• r-gtools

• r-lattice

• r-latticeextra

• r-mass

• r-rcolorbrewer

• r-xtable

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-hiiragi2013

and update with:

conda update bioconductor-hiiragi2013

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hiiragi2013:<tag>

(see bioconductor-hiiragi2013/tags for valid values for <tag>)

Download stats

Link to this page

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