recipe bioconductor-hitc

High Throughput Chromosome Conformation Capture analysis

Homepage

https://bioconductor.org/packages/3.11/bioc/html/HiTC.html

License

Artistic-2.0

Recipe

/bioconductor-hitc/meta.yaml

Links

biotools: hitc

The HiTC package was developed to explore high-throughput 'C' data such as 5C or Hi-C. Dedicated R classes as well as standard methods for quality controls, normalization, visualization, and further analysis are also provided.

package bioconductor-hitc

(downloads) docker_bioconductor-hitc

Versions

1.32.0-01.30.0-01.28.0-11.26.0-01.24.0-01.22.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-hitc

and update with:

conda update bioconductor-hitc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hitc:<tag>

(see bioconductor-hitc/tags for valid values for <tag>)