recipe bioconductor-icheck

QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/iCheck.html

License:

GPL (>= 2)

Recipe:

/bioconductor-icheck/meta.yaml

QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.

package bioconductor-icheck

Versions:

1.28.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.12.0-0

Depends:

• bioconductor-affy >=1.76.0,<1.77.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-geneselectmmd >=2.42.0,<2.43.0

• bioconductor-limma >=3.54.0,<3.55.0

• bioconductor-lumi >=2.50.0,<2.51.0

• bioconductor-preprocesscore >=1.60.0,<1.61.0

• r-base >=4.2,<4.3.0a0

• r-gplots

• r-lmtest

• r-mass

• r-randomforest

• r-rgl

• r-scatterplot3d

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-icheck

and update with:

conda update bioconductor-icheck

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-icheck:<tag>

(see bioconductor-icheck/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-icheck/README.html)