bioconductor-kegggraph

downloads

KEGGGraph is an interface between KEGG pathway and graph object as well as a collection of tools to analyze, dissect and visualize these graphs. It parses the regularly updated KGML (KEGG XML) files into graph models maintaining all essential pathway attributes. The package offers functionalities including parsing, graph operation, visualization and etc.

Home http://bioconductor.org/packages/3.6/bioc/html/KEGGgraph.html
Versions 1.28.0, 1.30.0, 1.38.0, 1.38.1
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-kegggraph

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-kegggraph

and update with:

conda update bioconductor-kegggraph

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-kegggraph.