recipe bioconductor-kegggraph

KEGGGraph is an interface between KEGG pathway and graph object as well as a collection of tools to analyze, dissect and visualize these graphs. It parses the regularly updated KGML (KEGG XML) files into graph models maintaining all essential pathway attributes. The package offers functionalities including parsing, graph operation, visualization and etc.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/KEGGgraph.html

License

GPL (>= 2)

Recipe

/bioconductor-kegggraph/meta.yaml

Links

biotools: kegggraph

package bioconductor-kegggraph

(downloads) docker_bioconductor-kegggraph

Versions

1.42.0-0, 1.40.0-0, 1.38.1-0, 1.38.0-0, 1.30.0-0, 1.28.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-kegggraph

and update with:

conda update bioconductor-kegggraph

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-kegggraph:<tag>

(see bioconductor-kegggraph/tags for valid values for <tag>)