recipe bioconductor-lumi

BeadArray Specific Methods for Illumina Methylation and Expression Microarrays

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/lumi.html

License:

LGPL (>= 2)

Recipe:

/bioconductor-lumi/meta.yaml

Links:

biotools: lumi

The lumi package provides an integrated solution for the Illumina microarray data analysis. It includes functions of Illumina BeadStudio (GenomeStudio) data input, quality control, BeadArray-specific variance stabilization, normalization and gene annotation at the probe level. It also includes the functions of processing Illumina methylation microarrays, especially Illumina Infinium methylation microarrays.

package bioconductor-lumi

(downloads) docker_bioconductor-lumi

Versions:
2.50.0-02.46.0-12.44.0-02.42.0-12.42.0-02.40.0-02.38.0-02.36.0-12.34.0-0

2.50.0-02.46.0-12.44.0-02.42.0-12.42.0-02.40.0-02.38.0-02.36.0-12.34.0-02.32.0-02.30.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-lumi

and update with:

conda update bioconductor-lumi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-lumi:<tag>

(see bioconductor-lumi/tags for valid values for <tag>)

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