bioconductor-lumi

downloads

The lumi package provides an integrated solution for the Illumina microarray data analysis. It includes functions of Illumina BeadStudio (GenomeStudio) data input, quality control, BeadArray-specific variance stabilization, normalization and gene annotation at the probe level. It also includes the functions of processing Illumina methylation microarrays, especially Illumina Infinium methylation microarrays.

Home http://bioconductor.org/packages/3.7/bioc/html/lumi.html
Versions 2.32.0, 2.30.0
License LGPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-lumi
Links biotools: lumi

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-lumi

and update with:

conda update bioconductor-lumi

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-lumi.