recipe bioconductor-magar

MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/MAGAR.html

License

GPL-3

Recipe

/bioconductor-magar/meta.yaml

"Methylation-Aware Genotype Association in R" (MAGAR) computes methQTL from DNA methylation and genotyping data from matched samples. MAGAR uses a linear modeling stragety to call CpGs/SNPs that are methQTLs. MAGAR accounts for the local correlation structure of CpGs.

package bioconductor-magar

(downloads) docker_bioconductor-magar

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-magar

and update with:

conda update bioconductor-magar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-magar:<tag>

(see bioconductor-magar/tags for valid values for <tag>)

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