recipe bioconductor-maser

This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/maser.html

License

MIT + file LICENSE

Recipe

/bioconductor-maser/meta.yaml

package bioconductor-maser

(downloads) docker_bioconductor-maser

Versions

1.0.0-0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-genomeinfodb

>=1.18.0,<1.19.0

Depends bioconductor-genomicranges

>=1.34.0,<1.35.0

Depends bioconductor-gviz

>=1.26.0,<1.27.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-rtracklayer

>=1.42.0,<1.43.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-data.table

Depends r-dplyr

Depends r-dt

Depends r-ggplot2

Depends r-reshape2

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-maser

and update with:

conda update bioconductor-maser

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-maser:<tag>

(see bioconductor-maser/tags for valid values for <tag>)