- recipe bioconductor-minfi
Analyze Illumina Infinium DNA methylation arrays
- Homepage
- License
Artistic-2.0
- Recipe
- Links
biotools: minfi
Tools to analyze & visualize Illumina Infinium methylation arrays.
- package bioconductor-minfi¶
-
- Versions
1.40.0-0
,1.38.0-0
,1.36.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.28.0-0
,1.26.2-0
,1.40.0-0
,1.38.0-0
,1.36.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.28.0-0
,1.26.2-0
,1.24.0-0
,1.22.1-0
,1.20.0-0
,1.16.1-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-biocparallel
>=1.28.0,<1.29.0
bioconductor-biostrings
>=2.62.0,<2.63.0
bioconductor-bumphunter
>=1.36.0,<1.37.0
bioconductor-delayedarray
>=0.20.0,<0.21.0
bioconductor-delayedmatrixstats
>=1.16.0,<1.17.0
bioconductor-genefilter
>=1.76.0,<1.77.0
bioconductor-genomeinfodb
>=1.30.0,<1.31.0
bioconductor-genomicranges
>=1.46.0,<1.47.0
bioconductor-geoquery
>=2.62.0,<2.63.0
bioconductor-hdf5array
>=1.22.0,<1.23.0
bioconductor-illuminaio
>=0.36.0,<0.37.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-preprocesscore
>=1.56.0,<1.57.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-siggenes
>=1.68.0,<1.69.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-minfi
and update with:
conda update bioconductor-minfi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-minfi:<tag>
(see bioconductor-minfi/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-minfi/README.html)