recipe bioconductor-minfidataepic

Data from 3 technical replicates of the cell line GM12878 from the EPIC methylation array.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/minfiDataEPIC.html

License

Artistic-2.0

Recipe

/bioconductor-minfidataepic/meta.yaml

package bioconductor-minfidataepic

(downloads) docker_bioconductor-minfidataepic

Versions

1.8.0-0

Depends bioconductor-illuminahumanmethylationepicanno.ilm10b2.hg19

>=0.6.0,<0.7.0

Depends bioconductor-illuminahumanmethylationepicmanifest

>=0.3.0,<0.4.0

Depends bioconductor-minfi

>=1.28.0,<1.29.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends wget

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-minfidataepic

and update with:

conda update bioconductor-minfidataepic

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-minfidataepic:<tag>

(see bioconductor-minfidataepic/tags for valid values for <tag>)