bioconductor-mirnapath

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This package provides pathway enrichment techniques for miRNA expression data. Specifically, the set of methods handles the many-to-many relationship between miRNAs and the multiple genes they are predicted to target (and thus affect.) It also handles the gene-to-pathway relationships separately. Both steps are designed to preserve the additive effects of miRNAs on genes, many miRNAs affecting one gene, one miRNA affecting multiple genes, or many miRNAs affecting many genes.

Home http://bioconductor.org/packages/3.6/bioc/html/miRNApath.html
Versions 1.36.0, 1.38.0
License LGPL-2.1
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mirnapath

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mirnapath

and update with:

conda update bioconductor-mirnapath

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mirnapath.