- recipe bioconductor-mirnatap
miRNAtap: microRNA Targets - Aggregated Predictions
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/miRNAtap.html
- License:
GPL-2
- Recipe:
- Links:
biotools: mirnatap, doi: 10.1038/nmeth.3252
The package facilitates implementation of workflows requiring miRNA predictions, it allows to integrate ranked miRNA target predictions from multiple sources available online and aggregate them with various methods which improves quality of predictions above any of the single sources. Currently predictions are available for Homo sapiens, Mus musculus and Rattus norvegicus (the last one through homology translation).
- package bioconductor-mirnatap¶
-
- Versions:
1.28.0-0
,1.26.0-0
,1.24.0-1
,1.24.0-0
,1.23.0-0
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.16.0-0
,1.28.0-0
,1.26.0-0
,1.24.0-1
,1.24.0-0
,1.23.0-0
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-mirnatap
and update with:
conda update bioconductor-mirnatap
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mirnatap:<tag>
(see bioconductor-mirnatap/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mirnatap/README.html)