bioconductor-mirnatap

downloads

The package facilitates implementation of workflows requiring miRNA predictions, it allows to integrate ranked miRNA target predictions from multiple sources available online and aggregate them with various methods which improves quality of predictions above any of the single sources. Currently predictions are available for Homo sapiens, Mus musculus and Rattus norvegicus (the last one through homology translation).

Home http://bioconductor.org/packages/3.6/bioc/html/miRNAtap.html
Versions 1.10.0, 1.12.0
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mirnatap

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mirnatap

and update with:

conda update bioconductor-mirnatap

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mirnatap.