recipe bioconductor-mmdiff2

This package detects statistically significant differences between read enrichment profiles in different ChIP-Seq samples. To take advantage of shape differences it uses Kernel methods (Maximum Mean Discrepancy, MMD).

Homepage

https://bioconductor.org/packages/3.9/bioc/html/MMDiff2.html

License

Artistic-2.0

Recipe

/bioconductor-mmdiff2/meta.yaml

Links

biotools: mmdiff2, doi: 10.1038/nmeth.3252

package bioconductor-mmdiff2

(downloads) docker_bioconductor-mmdiff2

Versions

1.10.0-0, 1.8.0-0, 1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mmdiff2

and update with:

conda update bioconductor-mmdiff2

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mmdiff2:<tag>

(see bioconductor-mmdiff2/tags for valid values for <tag>)