recipe bioconductor-mmdiffbamsubset

Example ChIP-Seq data for the MMDiff package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/MMDiffBamSubset.html

License:

LGPL

Recipe:

/bioconductor-mmdiffbamsubset/meta.yaml

Subset of BAM files, including WT_2.bam, Null_2.bam, Resc_2.bam, Input.bam from the "Cfp1" experiment (see Clouaire et al., Genes Dev. 2012). Data is available under ArrayExpress accession numbers E-ERAD-79. Additionally, corresponding subset of peaks called by MACS

package bioconductor-mmdiffbamsubset

(downloads) docker_bioconductor-mmdiffbamsubset

Versions:
1.33.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.25.0-0,  1.24.0-0,  1.22.0-0, 

1.33.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.25.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mmdiffbamsubset

and update with:

conda update bioconductor-mmdiffbamsubset

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mmdiffbamsubset:<tag>

(see bioconductor-mmdiffbamsubset/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mmdiffbamsubset/README.html)