recipe bioconductor-msstatssamplesize

Simulation tool for optimal design of high-dimensional MS-based proteomics experiment

Homepage

https://bioconductor.org/packages/3.11/bioc/html/MSstatsSampleSize.html

License

Artistic-2.0

Recipe

/bioconductor-msstatssamplesize/meta.yaml

The packages estimates the variance in the input protein abundance data and simulates data with predefined number of biological replicates based on the variance estimation. It reports the mean predictive accuracy of the classifier and mean protein importance over multiple iterations of the simulation.

package bioconductor-msstatssamplesize

(downloads) docker_bioconductor-msstatssamplesize

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-msstatssamplesize

and update with:

conda update bioconductor-msstatssamplesize

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-msstatssamplesize:<tag>

(see bioconductor-msstatssamplesize/tags for valid values for <tag>)