recipe bioconductor-muscat

Multi-sample multi-group scRNA-seq data analysis tools

Homepage

https://bioconductor.org/packages/3.10/bioc/html/muscat.html

License

GPL (>= 2)

Recipe

/bioconductor-muscat/meta.yaml

`muscat` provides various methods and visualization tools for DS analysis in multi-sample, multi-group, multi-(cell-)subpopulation scRNA-seq data, including cell-level mixed models and methods based on aggregated “pseudobulk” data, as well as a flexible simulation platform that mimics both single and multi-sample scRNA-seq data.

package bioconductor-muscat

(downloads) docker_bioconductor-muscat

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-muscat

and update with:

conda update bioconductor-muscat

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-muscat:<tag>

(see bioconductor-muscat/tags for valid values for <tag>)