bioconductor-mwastools

downloads

MWASTools provides a complete pipeline to perform metabolome-wide association studies. Key functionalities of the package include: quality control analysis of metabonomic data; MWAS using different association models (partial correlations; generalized linear models); model validation using non-parametric bootstrapping; visualization of MWAS results; NMR metabolite identification using STOCSY; and biological interpretation of MWAS results.

Home http://bioconductor.org/packages/3.7/bioc/html/MWASTools.html
Versions 1.4.0, 1.2.0
License CC BY-NC-ND 4.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mwastools

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mwastools

and update with:

conda update bioconductor-mwastools

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mwastools.