recipe bioconductor-mwastools

MWASTools: an integrated pipeline to perform metabolome-wide association studies

Homepage

https://bioconductor.org/packages/3.11/bioc/html/MWASTools.html

License

CC BY-NC-ND 4.0

Recipe

/bioconductor-mwastools/meta.yaml

MWASTools provides a complete pipeline to perform metabolome-wide association studies. Key functionalities of the package include: quality control analysis of metabonomic data; MWAS using different association models (partial correlations; generalized linear models); model validation using non-parametric bootstrapping; visualization of MWAS results; NMR metabolite identification using STOCSY; and biological interpretation of MWAS results.

package bioconductor-mwastools

(downloads) docker_bioconductor-mwastools

Versions

1.12.0-01.10.0-01.8.0-11.6.0-01.4.0-01.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mwastools

and update with:

conda update bioconductor-mwastools

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mwastools:<tag>

(see bioconductor-mwastools/tags for valid values for <tag>)