recipe bioconductor-mygene

MyGene.Info_ provides simple-to-use REST web services to query/retrieve gene annotation data. It’s designed with simplicity and performance emphasized. *mygene*, is an easy-to-use R wrapper to access MyGene.Info_ services.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/mygene.html License:Artistic-2.0 Recipe:/bioconductor-mygene/meta.yaml Links:biotools: mygene, doi: 10.1101/009333

package bioconductor-mygene

Versions:

1.18.0-0, 1.16.2-0, 1.14.0-0

Depends:

• bioconductor-genomicfeatures >=1.34.0,<1.35.0
• bioconductor-s4vectors >=0.20.0,<0.21.0
• r-base >=3.5.1,<3.5.2.0a0
• r-hmisc
• r-httr >=0.3
• r-jsonlite >=0.9.7
• r-plyr
• r-sqldf

Required By:

• bioconductor-metabosignal

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mygene

and update with:

conda update bioconductor-mygene

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mygene:<tag>

(see bioconductor-mygene/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mygene/README.html)