recipe bioconductor-mygene

Access MyGene.Info_ services

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/mygene.html

License:

Artistic-2.0

Recipe:

/bioconductor-mygene/meta.yaml

Links:

biotools: mygene, doi: 10.1101/009333

MyGene.Info_ provides simple-to-use REST web services to query/retrieve gene annotation data. It's designed with simplicity and performance emphasized. *mygene*, is an easy-to-use R wrapper to access MyGene.Info_ services.

package bioconductor-mygene

Versions:

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0, 

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0,  1.16.2-0,  1.14.0-0

Depends:

• bioconductor-genomicfeatures >=1.50.0,<1.51.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

• r-hmisc

• r-httr >=0.3

• r-jsonlite >=0.9.7

• r-plyr

• r-sqldf

Required By:

• bioconductor-metabosignal

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mygene

and update with:

conda update bioconductor-mygene

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mygene:<tag>

(see bioconductor-mygene/tags for valid values for <tag>)

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