- recipe bioconductor-mzr
parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)
- Homepage:
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: mzr
mzR provides a unified API to the common file formats and parsers available for mass spectrometry data. It comes with a subset of the proteowizard library for mzXML, mzML and mzIdentML. The netCDF reading code has previously been used in XCMS.
- package bioconductor-mzr¶
-
- Versions:
2.32.0-1
,2.32.0-0
,2.28.0-2
,2.28.0-1
,2.28.0-0
,2.26.0-0
,2.24.1-0
,2.24.0-0
,2.22.0-0
,2.32.0-1
,2.32.0-0
,2.28.0-2
,2.28.0-1
,2.28.0-0
,2.26.0-0
,2.24.1-0
,2.24.0-0
,2.22.0-0
,2.20.0-0
,2.18.0-1
,2.16.2-1
,2.16.2-0
,2.16.0-0
,2.12.0-1
,2.10.0-0
,2.6.3-1
,2.6.3-0
,2.4.1-1
- Depends:
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-protgenerics
>=1.30.0,<1.31.0
bioconductor-rhdf5lib
>=1.20.0,<1.21.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
libstdcxx-ng
>=12
r-base
>=4.2,<4.3.0a0
r-rcpp
>=0.10.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-mzr
and update with:
conda update bioconductor-mzr
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mzr:<tag>
(see bioconductor-mzr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mzr/README.html)