recipe bioconductor-oligoclasses

This package contains class definitions, validity checks, and initialization methods for classes used by the oligo and crlmm packages.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/oligoClasses.html

License

GPL (>= 2)

Recipe

/bioconductor-oligoclasses/meta.yaml

Links

biotools: oligoclasses, doi: 10.1038/nmeth.3252

package bioconductor-oligoclasses

(downloads) docker_bioconductor-oligoclasses

Versions

1.44.0-0, 1.42.0-0, 1.40.0-0, 1.38.0-0

Depends bioconductor-affyio

>=1.52.0,<1.53.0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-biostrings

>=2.50.0,<2.51.0

Depends bioconductor-genomicranges

>=1.34.0,<1.35.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-s4vectors

>=0.20.0,<0.21.0

Depends bioconductor-summarizedexperiment

>=1.12.0,<1.13.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-biocmanager

Depends r-dbi

Depends r-ff

Depends r-foreach

Depends r-rsqlite

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-oligoclasses

and update with:

conda update bioconductor-oligoclasses

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-oligoclasses:<tag>

(see bioconductor-oligoclasses/tags for valid values for <tag>)