recipe bioconductor-opencyto

This package is designed to facilitate the automated gating methods in sequential way to mimic the manual gating strategy.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/openCyto.html

License

Artistic-2.0

Recipe

/bioconductor-opencyto/meta.yaml

package bioconductor-opencyto

(downloads) docker_bioconductor-opencyto

Versions

1.20.1-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-flowclust

>=3.20.0,<3.21.0

Depends bioconductor-flowcore

>=1.48.0,<1.49.0

Depends bioconductor-flowstats

>=3.40.0,<3.41.0

Depends bioconductor-flowviz

>=1.46.0,<1.47.0

Depends bioconductor-flowworkspace

>=3.30.0,<3.31.0

Depends bioconductor-graph

>=1.60.0,<1.61.0

Depends bioconductor-ncdfflow

>=2.28.0,<2.29.0

Depends bioconductor-rbgl

>=1.58.0,<1.59.0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-clue

Depends r-data.table

Depends r-gtools

Depends r-ks

Depends r-lattice

Depends r-mass

Depends r-plyr

Depends r-r.utils

Depends r-rcolorbrewer

Depends r-rcpp

Depends r-rrcov

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-opencyto

and update with:

conda update bioconductor-opencyto

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-opencyto:<tag>

(see bioconductor-opencyto/tags for valid values for <tag>)