Package Recipe 'bioconductor-pagerank'

recipe bioconductor-pagerank

Temporal and Multiplex PageRank for Gene Regulatory Network Analysis

Homepage:: https://bioconductor.org/packages/3.16/bioc/html/pageRank.html
License:: GPL-2
Recipe:: /bioconductor-pagerank/meta.yaml

Implemented temporal PageRank analysis as defined by Rozenshtein and Gionis. Implemented multiplex PageRank as defined by Halu et al. Applied temporal and multiplex PageRank in gene regulatory network analysis.

package bioconductor-pagerank¶

Versions:

1.8.0-0, 1.4.0-0, 1.2.0-0, 1.0.0-2, 1.0.0-1

Depends:

bioconductor-genomicranges >=1.50.0,<1.51.0
bioconductor-motifmatchr >=1.20.0,<1.21.0
r-base >=4.2,<4.3.0a0
r-igraph

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-pagerank

and update with:

conda update bioconductor-pagerank

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pagerank:<tag>

(see bioconductor-pagerank/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pagerank/README.html)