Package Recipe 'bioconductor-polyester'

recipe bioconductor-polyester¶

This package can be used to simulate RNA-seq reads from differential expression experiments with replicates. The reads can then be aligned and used to perform comparisons of methods for differential expression.

Homepage: https://bioconductor.org/packages/3.9/bioc/html/polyester.html
License: Artistic-2.0
Recipe: /bioconductor-polyester/meta.yaml

package bioconductor-polyester¶

Versions: 1.18.0-0
Depends bioconductor-biostrings: >=2.50.0,<2.51.0
Depends bioconductor-iranges: >=2.16.0,<2.17.0
Depends bioconductor-limma: >=3.38.0,<3.39.0
Depends bioconductor-s4vectors: >=0.20.0,<0.21.0
Depends bioconductor-zlibbioc: >=1.28.0,<1.29.0
Depends r-base: >=3.5.1,<3.5.2.0a0
Depends r-logspline
Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-polyester

and update with:

conda update bioconductor-polyester

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-polyester:<tag>

(see bioconductor-polyester/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-polyester/README.html)