recipe bioconductor-progeny

Pathway RespOnsive GENes for activity inference from gene expression

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/progeny.html

License:

Apache License (== 2.0) | file LICENSE

Recipe:

/bioconductor-progeny/meta.yaml

PROGENy is resource that leverages a large compendium of publicly available signaling perturbation experiments to yield a common core of pathway responsive genes for human and mouse. These, coupled with any statistical method, can be used to infer pathway activities from bulk or single-cell transcriptomics.

package bioconductor-progeny

(downloads) docker_bioconductor-progeny

Versions:
1.20.0-01.16.0-01.14.0-01.12.0-11.12.0-01.10.0-01.8.0-01.6.0-11.4.1-0

1.20.0-01.16.0-01.14.0-01.12.0-11.12.0-01.10.0-01.8.0-01.6.0-11.4.1-01.4.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-progeny

and update with:

conda update bioconductor-progeny

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-progeny:<tag>

(see bioconductor-progeny/tags for valid values for <tag>)

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