- recipe bioconductor-qckitfastq
FASTQ Quality Control
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/qckitfastq.html
- License:
Artistic-2.0
- Recipe:
Assessment of FASTQ file format with multiple metrics including quality score, sequence content, overrepresented sequence and Kmers.
- package bioconductor-qckitfastq¶
-
- Versions:
1.14.0-0
,1.10.0-2
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-2
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.14.0-0
,1.10.0-2
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-2
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.2.0-0
,1.0.0-1
,1.0.0-0
- Depends:
bioconductor-rseqan
>=1.18.0,<1.19.0
bioconductor-seqtools
>=1.32.0,<1.33.0
bioconductor-zlibbioc
>=1.44.0,<1.45.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
libstdcxx-ng
>=12
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-qckitfastq
and update with:
conda update bioconductor-qckitfastq
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-qckitfastq:<tag>
(see bioconductor-qckitfastq/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-qckitfastq/README.html)