recipe bioconductor-rgadem

rGADEM is an efficient de novo motif discovery tool for large-scale genomic sequence data. It is an open-source R package, which is based on the GADEM software.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/rGADEM.html

License

Artistic-2.0

Recipe

/bioconductor-rgadem/meta.yaml

Links

biotools: rgadem, doi: 10.1371/journal.pone.0016432

package bioconductor-rgadem

(downloads) docker_bioconductor-rgadem

Versions

2.30.0-0, 2.28.0-0, 2.26.0-0, 2.24.0-0, 2.22.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rgadem

and update with:

conda update bioconductor-rgadem

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rgadem:<tag>

(see bioconductor-rgadem/tags for valid values for <tag>)