recipe bioconductor-roar

Identify differential APA usage from RNA-seq alignments

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/roar.html

License:

GPL-3

Recipe:

/bioconductor-roar/meta.yaml

Links:

biotools: roar, doi: 10.1038/nmeth.3252

Identify preferential usage of APA sites, comparing two biological conditions, starting from known alternative sites and alignments obtained from standard RNA-seq experiments.

package bioconductor-roar

(downloads) docker_bioconductor-roar

Versions:
1.34.0-01.30.0-01.28.0-01.26.0-11.26.0-01.24.0-01.22.0-01.20.0-11.18.0-0

1.34.0-01.30.0-01.28.0-01.26.0-11.26.0-01.24.0-01.22.0-01.20.0-11.18.0-01.16.0-01.14.0-01.12.0-01.10.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-roar

and update with:

conda update bioconductor-roar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-roar:<tag>

(see bioconductor-roar/tags for valid values for <tag>)

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