recipe bioconductor-rots

Reproducibility-Optimized Test Statistic

Homepage

https://bioconductor.org/packages/3.13/bioc/html/ROTS.html

License

GPL (>= 2)

Recipe

/bioconductor-rots/meta.yaml

Links

biotools: rots, doi: 10.1109/tcbb.2007.1078

Calculates the Reproducibility-Optimized Test Statistic (ROTS) for differential testing in omics data.

package bioconductor-rots

Versions

1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.1-0,  1.10.0-0,  1.8.0-0, 

1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.1-0,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.0.0-0

Depends

• bioconductor-biobase >=2.52.0,<2.53.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=9.3.0

• liblapack >=3.8.0,<4.0a0

• libstdcxx-ng >=9.3.0

• r-base >=4.1,<4.2.0a0

• r-rcpp

Required By

• bioconductor-peca

• mosca

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rots

and update with:

conda update bioconductor-rots

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rots:<tag>

(see bioconductor-rots/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rots/README.html)