recipe bioconductor-rsamtools

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/Rsamtools.html

License:

Artistic-2.0 | file LICENSE

Recipe:

/bioconductor-rsamtools/meta.yaml

Links:

biotools: rsamtools, doi: 10.1038/nmeth.3252

This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

package bioconductor-rsamtools

(downloads) docker_bioconductor-rsamtools

Versions:
2.10.0-22.10.0-12.10.0-02.8.0-02.6.0-12.6.0-02.4.0-02.2.0-02.0.0-1

2.10.0-22.10.0-12.10.0-02.8.0-02.6.0-12.6.0-02.4.0-02.2.0-02.0.0-11.34.0-01.32.3-01.30.0-01.28.0-01.26.1-01.24.0-01.22.0-11.22.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rsamtools

and update with:

conda update bioconductor-rsamtools

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rsamtools:<tag>

(see bioconductor-rsamtools/tags for valid values for <tag>)

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