recipe bioconductor-rtcga.methylation

Methylation datasets from The Cancer Genome Atlas Project

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/RTCGA.methylation.html

License

GPL-2

Recipe

/bioconductor-rtcga.methylation/meta.yaml

Package provides methylation (humanmethylation27) datasets from The Cancer Genome Atlas Project for all available cohorts types from http://gdac.broadinstitute.org/. Data format is explained here https://wiki.nci.nih.gov/display/TCGA/DNA+methylation Data from 2015-11-01 snapshot.

package bioconductor-rtcga.methylation

(downloads) docker_bioconductor-rtcga.methylation

Versions

1.16.0-0, 1.14.0-0, 1.12.0-1, 1.12.0-0, 1.10.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rtcga.methylation

and update with:

conda update bioconductor-rtcga.methylation

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rtcga.methylation:<tag>

(see bioconductor-rtcga.methylation/tags for valid values for <tag>)