recipe bioconductor-rtreemix

Rtreemix: Mutagenetic trees mixture models.

Homepage

https://bioconductor.org/packages/3.11/bioc/html/Rtreemix.html

License

LGPL

Recipe

/bioconductor-rtreemix/meta.yaml

Links

biotools: rtreemix, doi: 10.1093/bioinformatics/btn410

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

package bioconductor-rtreemix

(downloads) docker_bioconductor-rtreemix

Versions

1.50.0-0, 1.48.0-0, 1.46.0-1, 1.44.0-0, 1.42.0-0, 1.40.0-0, 1.38.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rtreemix

and update with:

conda update bioconductor-rtreemix

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rtreemix:<tag>

(see bioconductor-rtreemix/tags for valid values for <tag>)