recipe bioconductor-ruvnormalize

RUVnormalize is meant to remove unwanted variation from gene expression data when the factor of interest is not defined, e.g., to clean up a dataset for general use or to do any kind of unsupervised analysis.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/RUVnormalize.html

License

GPL-3

Recipe

/bioconductor-ruvnormalize/meta.yaml

Links

biotools: ruvnormalize

package bioconductor-ruvnormalize

(downloads) docker_bioconductor-ruvnormalize

Versions

1.16.0-0, 1.14.0-0, 1.12.0-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-ruvnormalizedata

>=1.2.0,<1.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ruvnormalize

and update with:

conda update bioconductor-ruvnormalize

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ruvnormalize:<tag>

(see bioconductor-ruvnormalize/tags for valid values for <tag>)