bioconductor-safe

downloads

SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.

Home http://bioconductor.org/packages/3.6/bioc/html/safe.html
Versions 3.16.0, 3.18.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-safe

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-safe

and update with:

conda update bioconductor-safe

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-safe.