recipe bioconductor-safe

SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/safe.html

License

GPL (>= 2)

Recipe

/bioconductor-safe/meta.yaml

Links

biotools: safe, doi: 10.1093/bioinformatics/bti260

package bioconductor-safe

(downloads) docker_bioconductor-safe

Versions

3.22.0-0, 3.20.0-0, 3.18.0-0, 3.16.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-safe

and update with:

conda update bioconductor-safe

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-safe:<tag>

(see bioconductor-safe/tags for valid values for <tag>)