- recipe bioconductor-sc3
Single-Cell Consensus Clustering
- Homepage:
- License:
GPL-3
- Recipe:
- Links:
biotools: sc3
A tool for unsupervised clustering and analysis of single cell RNA-Seq data.
- package bioconductor-sc3¶
-
- Versions:
1.22.0-1
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.18.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.10.0-0
,1.22.0-1
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.18.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.10.0-0
,1.8.0-0
,1.7.6-0
- Depends:
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-singlecellexperiment
>=1.16.0,<1.17.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-base
>=4.1,<4.2.0a0
r-pheatmap
>=1.0.8
r-rcpp
>=0.11.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-sc3
and update with:
conda update bioconductor-sc3
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-sc3:<tag>
(see bioconductor-sc3/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-sc3/README.html)