recipe bioconductor-scthi

Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/scTHI.html

License

GPL-2

Recipe

/bioconductor-scthi/meta.yaml

scTHI is an R package to identify active pairs of ligand-receptors from single cells in order to study,among others, tumor-host interactions. scTHI contains a set of signatures to classify cells from the tumor microenvironment.

package bioconductor-scthi

(downloads) docker_bioconductor-scthi

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-scthi

and update with:

conda update bioconductor-scthi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scthi:<tag>

(see bioconductor-scthi/tags for valid values for <tag>)