recipe bioconductor-scthi

Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/scTHI.html

License:

GPL-2

Recipe:

/bioconductor-scthi/meta.yaml

scTHI is an R package to identify active pairs of ligand-receptors from single cells in order to study,among others, tumor-host interactions. scTHI contains a set of signatures to classify cells from the tumor microenvironment.

package bioconductor-scthi

(downloads) docker_bioconductor-scthi

Versions:

1.10.0-01.6.0-01.4.0-01.2.0-11.2.0-01.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-scthi

and update with:

conda update bioconductor-scthi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scthi:<tag>

(see bioconductor-scthi/tags for valid values for <tag>)

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