recipe bioconductor-sdams

Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data

Homepage

https://bioconductor.org/packages/3.13/bioc/html/SDAMS.html

License

GPL

Recipe

/bioconductor-sdams/meta.yaml

This Package utilizes a Semi-parametric Differential Abundance/expression analysis (SDA) method for metabolomics and proteomics data from mass spectrometry as well as single-cell RNA sequencing data. SDA is able to robustly handle non-normally distributed data and provides a clear quantification of the effect size.

package bioconductor-sdams

(downloads) docker_bioconductor-sdams

Versions

1.12.0-01.10.0-11.10.0-01.8.0-01.6.0-01.4.0-11.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sdams

and update with:

conda update bioconductor-sdams

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sdams:<tag>

(see bioconductor-sdams/tags for valid values for <tag>)