recipe bioconductor-selectksigs

Selecting the number of mutational signatures using a perplexity-based measure and cross-validation

Homepage

https://bioconductor.org/packages/3.11/bioc/html/selectKSigs.html

License

GPL-3

Recipe

/bioconductor-selectksigs/meta.yaml

A package to suggest the number of mutational signatures in a collection of somatic mutations using calculating the cross-validated perplexity score.

package bioconductor-selectksigs

(downloads) docker_bioconductor-selectksigs

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-selectksigs

and update with:

conda update bioconductor-selectksigs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-selectksigs:<tag>

(see bioconductor-selectksigs/tags for valid values for <tag>)