recipe bioconductor-seqsqc

The SeqSQC is designed to identify problematic samples in NGS data, including samples with gender mismatch, contamination, cryptic relatedness, and population outlier.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/SeqSQC.html

License

GPL-3

Recipe

/bioconductor-seqsqc/meta.yaml

package bioconductor-seqsqc

(downloads) docker_bioconductor-seqsqc

Versions

1.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-seqsqc

and update with:

conda update bioconductor-seqsqc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-seqsqc:<tag>

(see bioconductor-seqsqc/tags for valid values for <tag>)