bioconductor-simbindprofiles¶
SimBindProfiles identifies common and unique binding regions in genome tiling array data. This package does not rely on peak calling, but directly compares binding profiles processed on the same array platform. It implements a simple threshold approach, thus allowing retrieval of commonly and differentially bound regions between datasets as well as events of compensation and increased binding.
| Home | http://bioconductor.org/packages/3.7/bioc/html/SimBindProfiles.html |
| Versions | 1.14.0, 1.16.0, 1.18.0 |
| License | GPL-3 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-simbindprofiles |
| Links | biotools: simbindprofiles, doi: 10.1038/nmeth.3252 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-simbindprofiles
and update with:
conda update bioconductor-simbindprofiles
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-simbindprofiles.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-simbindprofiles/README.html)
