bioconductor-singlecellexperiment

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Defines a S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.

Home http://bioconductor.org/packages/3.7/bioc/html/SingleCellExperiment.html
Versions 1.2.0, 1.0.0
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-singlecellexperiment

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-singlecellexperiment

and update with:

conda update bioconductor-singlecellexperiment

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-singlecellexperiment.