recipe bioconductor-spectra

Spectra Infrastructure for Mass Spectrometry Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/Spectra.html

License:

Artistic-2.0

Recipe:

/bioconductor-spectra/meta.yaml

The Spectra package defines an efficient infrastructure for storing and handling mass spectrometry spectra and functionality to subset, process, visualize and compare spectra data. It provides different implementations (backends) to store mass spectrometry data. These comprise backends tuned for fast data access and processing and backends for very large data sets ensuring a small memory footprint.

package bioconductor-spectra

Versions:

1.8.0-0,  1.4.0-0,  1.2.0-0,  1.0.5-0,  1.0.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-biocparallel >=1.32.0,<1.33.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-mscoreutils >=1.10.0,<1.11.0

• bioconductor-protgenerics >=1.30.0,<1.31.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• r-base >=4.2,<4.3.0a0

• r-fs

Required By:

• bioconductor-metcirc

• bioconductor-msbackendmgf

• bioconductor-msexperiment

• bioconductor-msbackendrawfilereader

• bioconductor-compounddb

• bioconductor-msbackendmassbank

• bioconductor-mobilitytransformr

• bioconductor-msbackendmsp

• bioconductor-metaboannotation

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-spectra

and update with:

conda update bioconductor-spectra

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-spectra:<tag>

(see bioconductor-spectra/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-spectra/README.html)