bioconductor-spia¶
This package implements the Signaling Pathway Impact Analysis (SPIA) which uses the information form a list of differentially expressed genes and their log fold changes together with signaling pathways topology, in order to identify the pathways most relevant to the condition under the study.
| Home | http://bioconductor.org/packages/3.6/bioc/html/SPIA.html |
| Versions | 2.28.0, 2.30.0 |
| License | file LICENSE |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-spia |
| Links | biotools: spia, doi: 10.1093/bioinformatics/btn577 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-spia
and update with:
conda update bioconductor-spia
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-spia.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-spia/README.html)
