recipe bioconductor-stjudem

Microarray Data from Yeoh et al. in MACAT format

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/stjudem.html

License

LGPL (>= 2)

Recipe

/bioconductor-stjudem/meta.yaml

This is a microarray data set on acute lymphoblastic leukemia, published in 2002 (Yeoh et al.Cancer Cell 2002). The experiments were conducted in the St.Jude Children’s Research Hospital, Memphis, Tenessee, USA. The raw data was preprocessed by variance stabilizing normalization (Huber et al.) on probe and subsequent summarization of probe expression values into probe set expression values using median polish.

package bioconductor-stjudem

(downloads) docker_bioconductor-stjudem

Versions

1.28.0-01.26.0-01.24.0-11.24.0-01.22.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-stjudem

and update with:

conda update bioconductor-stjudem

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-stjudem:<tag>

(see bioconductor-stjudem/tags for valid values for <tag>)