recipe bioconductor-stringdb

STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

Homepage

https://bioconductor.org/packages/3.11/bioc/html/STRINGdb.html

License

GPL-2

Recipe

/bioconductor-stringdb/meta.yaml

Links

biotools: stringdb

The STRINGdb package provides a R interface to the STRING protein-protein interactions database (https://www.string-db.org).

package bioconductor-stringdb

(downloads) docker_bioconductor-stringdb

Versions

2.0.0-0, 1.26.0-0, 1.24.0-1, 1.24.0-0, 1.22.0-0, 1.20.0-0, 1.18.0-0, 1.16.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-stringdb

and update with:

conda update bioconductor-stringdb

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-stringdb:<tag>

(see bioconductor-stringdb/tags for valid values for <tag>)